WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C42D8.8b.1 Sequence Name  C42D8.8b.1
Length (nt)  2055   Chromosome Location  X: 5113100-5116864
Chromosome . Primary Identifier  X Chromosome Location . Start  5113100
Chromosome Location . End  5116864 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42D8.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000149 apl-1 C42D8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C42D8.8b C42D8.8b 2055   X: 5113100-5113420

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C42D8.8b.1 5113100 5116864 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232621   321   X: 5113100-5113420 Caenorhabditis elegans
Exon232622   123   X: 5113469-5113591 Caenorhabditis elegans
Exon232625   199   X: 5113650-5113848 Caenorhabditis elegans
Exon232627   183   X: 5113898-5114080 Caenorhabditis elegans
Exon232629   197   X: 5114124-5114320 Caenorhabditis elegans
Exon232631   210   X: 5114374-5114583 Caenorhabditis elegans
Exon232633   134   X: 5114723-5114856 Caenorhabditis elegans
Exon232635   93   X: 5114910-5115002 Caenorhabditis elegans
Exon232637   234   X: 5115139-5115372 Caenorhabditis elegans
Exon232639   127   X: 5115556-5115682 Caenorhabditis elegans
Exon232642   168   X: 5116171-5116338 Caenorhabditis elegans
Exon232643   66   X: 5116799-5116864 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C42D8.8b.1 5113100 5116864 -1

1 Sequence

Length
2055

1 Sequence Ontology Term

Identifier Name Description
transcript