WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C42D8.1.1 Sequence Name  C42D8.1.1
Length (nt)  859   Chromosome Location  X: 5109506-5112426
Chromosome . Primary Identifier  X Chromosome Location . Start  5109506
Chromosome Location . End  5112426 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42D8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016599 C42D8.1 C42D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C42D8.1 C42D8.1 759   X: 5109510-5109644

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C42D8.1.1 5109506 5112426 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232612   139   X: 5109506-5109644 Caenorhabditis elegans
Exon232613   84   X: 5110473-5110556 Caenorhabditis elegans
Exon232614   99   X: 5110610-5110708 Caenorhabditis elegans
Exon232615   108   X: 5110762-5110869 Caenorhabditis elegans
Exon232616   147   X: 5111054-5111200 Caenorhabditis elegans
Exon232617   60   X: 5111250-5111309 Caenorhabditis elegans
Exon232618   51   X: 5111423-5111473 Caenorhabditis elegans
Exon232619   171   X: 5112256-5112426 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C42D8.1.1 5109506 5112426 1

1 Sequence

Length
859

1 Sequence Ontology Term

Identifier Name Description
transcript