WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C42D8.3.1 Sequence Name  C42D8.3.1
Length (nt)  2524   Chromosome Location  X: 5087840-5092538
Chromosome . Primary Identifier  X Chromosome Location . Start  5087840
Chromosome Location . End  5092538 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42D8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006862 pnk-4 C42D8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C42D8.3 C42D8.3 2268   X: 5087856-5088005

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C42D8.3.1 5087840 5092538 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232579   166   X: 5087840-5088005 Caenorhabditis elegans
Exon232580   188   X: 5088326-5088513 Caenorhabditis elegans
Exon232581   363   X: 5088793-5089155 Caenorhabditis elegans
Exon232582   157   X: 5089769-5089925 Caenorhabditis elegans
Exon232583   560   X: 5089981-5090540 Caenorhabditis elegans
Exon232584   163   X: 5090588-5090750 Caenorhabditis elegans
Exon232585   464   X: 5091043-5091506 Caenorhabditis elegans
Exon232586   124   X: 5091553-5091676 Caenorhabditis elegans
Exon232587   339   X: 5092200-5092538 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C42D8.3.1 5087840 5092538 1

1 Sequence

Length
2524

1 Sequence Ontology Term

Identifier Name Description
transcript