WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F39C12.3a Sequence Name  F39C12.3a
Length (nt)  1284   Chromosome Location  X: 4867112-4867387
Chromosome . Primary Identifier  X Chromosome Location . Start  4867112
Chromosome Location . End  4867387
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39C12.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE10096 TSP-14, isoform a 47.6 427 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00046767
WBRNAi00014596
WBRNAi00031985

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F39C12.3a 4867112 4867387 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006640 tsp-14 F39C12.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F39C12.3a 4867112 4867387 -1
CDS:F39C12.3a 4867813 4867992 -1
CDS:F39C12.3a 4868040 4868228 -1
CDS:F39C12.3a 4868866 4869012 -1
CDS:F39C12.3a 4869119 4869211 -1
CDS:F39C12.3a 4869261 4869347 -1
CDS:F39C12.3a 4869397 4869582 -1
CDS:F39C12.3a 4870897 4871022 -1

1 Sequence

Length
1284

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F39C12.3a.2 F39C12.3a.2 1752   X: 4866681-4871059
Transcript:F39C12.3a.3 F39C12.3a.3 1901   X: 4866681-4876965
Transcript:F39C12.3a.1 F39C12.3a.1 2034   X: 4866684-4874657