WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08E3.3a.1 Sequence Name  R08E3.3a.1
Length (nt)  1387   Chromosome Location  X: 4818599-4820817
Chromosome . Primary Identifier  X Chromosome Location . Start  4818599
Chromosome Location . End  4820817 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08E3.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019959 R08E3.3 R08E3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08E3.3a R08E3.3a 1368   X: 4818618-4818667

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R08E3.3a.1 4818599 4820817 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231647   69   X: 4818599-4818667 Caenorhabditis elegans
Exon231648   63   X: 4818722-4818784 Caenorhabditis elegans
Exon231650   112   X: 4818841-4818952 Caenorhabditis elegans
Exon231652   127   X: 4819003-4819129 Caenorhabditis elegans
Exon231654   113   X: 4819186-4819298 Caenorhabditis elegans
Exon231656   267   X: 4819707-4819973 Caenorhabditis elegans
Exon231658   123   X: 4820021-4820143 Caenorhabditis elegans
Exon231660   114   X: 4820191-4820304 Caenorhabditis elegans
Exon231662   102   X: 4820353-4820454 Caenorhabditis elegans
Exon231665   297   X: 4820521-4820817 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R08E3.3a.1 4818599 4820817 1

1 Sequence

Length
1387

1 Sequence Ontology Term

Identifier Name Description
transcript