Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:R08E3.5 | R08E3.5 |
279
 |
X: 4812826-4813104 |
Other
12 Allele
| Public Name |
|---|
| gk964260 |
| gk962667 |
| WBVar01980578 |
| WBVar01980577 |
| gk278994 |
| gk575357 |
| gk278993 |
| gk826618 |
| WBVar01710912 |
| gk334394 |
| tm10867 |
| gk589075 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00196013 | 4812826 | 4813104 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_4813105..4813169 | 65 | X: 4813105-4813169 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type. | DESeq2, fold change > 2, FDR < 0.05. | WBPaper00066485:ogt-1(ok1474)_upregulated_neuron | |
| ncRNAs with significantly decreased expression in cep-1(gk138) than in N2 after UV irradiation, according to RNAseq. | ncRNAs with more than 2 fold difference in expression are considered differentially expressed | WBPaper00045380:cep-1(gk138)_downregulated_UV | |
| ncRNAs with significantly increased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq. | ncRNAs with more than 2 fold difference in expression are considered differentially expressed | WBPaper00045380:cep-1(gk138)_upregulated_normal |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_4811541..4812825 | 1285 | X: 4811541-4812825 | Caenorhabditis elegans |
