WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08E3.4a.1 Sequence Name  R08E3.4a.1
Length (nt)  1355   Chromosome Location  X: 4807544-4811536
Chromosome . Primary Identifier  X Chromosome Location . Start  4807544
Chromosome Location . End  4811536 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08E3.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019960 ztf-16 R08E3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08E3.4a R08E3.4a 1344   X: 4807544-4807831

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R08E3.4a.1 4807544 4811536 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231618   288   X: 4807544-4807831 Caenorhabditis elegans
Exon231620   126   X: 4807880-4808005 Caenorhabditis elegans
Exon231622   180   X: 4808074-4808253 Caenorhabditis elegans
Exon231624   225   X: 4808446-4808670 Caenorhabditis elegans
Exon231627   90   X: 4809567-4809656 Caenorhabditis elegans
Exon231629   69   X: 4809821-4809889 Caenorhabditis elegans
Exon231632   92   X: 4810600-4810691 Caenorhabditis elegans
Exon231634   145   X: 4810795-4810939 Caenorhabditis elegans
Exon231636   56   X: 4811184-4811239 Caenorhabditis elegans
Exon231638   84   X: 4811453-4811536 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R08E3.4a.1 4807544 4811536 -1

1 Sequence

Length
1355

1 Sequence Ontology Term

Identifier Name Description
transcript