WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08E3.4b.1 Sequence Name  R08E3.4b.1
Length (nt)  2154   Chromosome Location  X: 4805998-4811540
Chromosome . Primary Identifier  X Chromosome Location . Start  4805998
Chromosome Location . End  4811540 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08E3.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019960 ztf-16 R08E3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08E3.4b R08E3.4b 1443   X: 4806694-4806876

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R08E3.4b.1 4805998 4811540 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231617   879   X: 4805998-4806876 Caenorhabditis elegans
Exon231619   204   X: 4807628-4807831 Caenorhabditis elegans
Exon231621   126   X: 4807880-4808005 Caenorhabditis elegans
Exon231623   180   X: 4808074-4808253 Caenorhabditis elegans
Exon231625   225   X: 4808446-4808670 Caenorhabditis elegans
Exon231628   90   X: 4809567-4809656 Caenorhabditis elegans
Exon231630   69   X: 4809821-4809889 Caenorhabditis elegans
Exon231633   92   X: 4810600-4810691 Caenorhabditis elegans
Exon231635   145   X: 4810795-4810939 Caenorhabditis elegans
Exon231637   56   X: 4811184-4811239 Caenorhabditis elegans
Exon231639   88   X: 4811453-4811540 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R08E3.4b.1 4805998 4811540 -1

1 Sequence

Length
2154

1 Sequence Ontology Term

Identifier Name Description
transcript