WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39E6.6.1 Sequence Name  C39E6.6.1
Length (nt)  1497   Chromosome Location  X: 4767152-4769985
Chromosome . Primary Identifier  X Chromosome Location . Start  4767152
Chromosome Location . End  4769985 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39E6.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003807 npr-1 C39E6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39E6.6 C39E6.6 1374   X: 4767264-4767324

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C39E6.6.1 4767152 4769985 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231544   173   X: 4767152-4767324 Caenorhabditis elegans
Exon231545   216   X: 4767370-4767585 Caenorhabditis elegans
Exon231546   111   X: 4767635-4767745 Caenorhabditis elegans
Exon231547   165   X: 4768350-4768514 Caenorhabditis elegans
Exon231548   62   X: 4768560-4768621 Caenorhabditis elegans
Exon231549   252   X: 4768672-4768923 Caenorhabditis elegans
Exon231550   188   X: 4768983-4769170 Caenorhabditis elegans
Exon231551   145   X: 4769220-4769364 Caenorhabditis elegans
Exon231552   185   X: 4769801-4769985 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C39E6.6.1 4767152 4769985 -1

1 Sequence

Length
1497

1 Sequence Ontology Term

Identifier Name Description
transcript