WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39E6.1.1 Sequence Name  C39E6.1.1
Length (nt)  1916   Chromosome Location  X: 4738964-4749083
Chromosome . Primary Identifier  X Chromosome Location . Start  4738964
Chromosome Location . End  4749083 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39E6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003056 lon-2 C39E6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39E6.1 C39E6.1 1527   X: 4739352-4739476

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C39E6.1.1 4738964 4749083 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231516   513   X: 4738964-4739476 Caenorhabditis elegans
Exon231517   178   X: 4740411-4740588 Caenorhabditis elegans
Exon231519   52   X: 4744022-4744073 Caenorhabditis elegans
Exon231520   107   X: 4746133-4746239 Caenorhabditis elegans
Exon231521   183   X: 4746321-4746503 Caenorhabditis elegans
Exon231522   124   X: 4747066-4747189 Caenorhabditis elegans
Exon231523   165   X: 4747239-4747403 Caenorhabditis elegans
Exon231524   200   X: 4747451-4747650 Caenorhabditis elegans
Exon231525   149   X: 4747703-4747851 Caenorhabditis elegans
Exon231526   130   X: 4748233-4748362 Caenorhabditis elegans
Exon231527   115   X: 4748969-4749083 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C39E6.1.1 4738964 4749083 -1

1 Sequence

Length
1916

1 Sequence Ontology Term

Identifier Name Description
transcript