WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13H2.5b.1 Sequence Name  T13H2.5b.1
Length (nt)  3279   Chromosome Location  X: 4596199-4599989
Chromosome . Primary Identifier  X Chromosome Location . Start  4596199
Chromosome Location . End  4599989 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13H2.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020496 spat-3 T13H2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13H2.5b T13H2.5b 3279   X: 4596199-4596384

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T13H2.5b.1 4596199 4599989 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231135   186   X: 4596199-4596384 Caenorhabditis elegans
Exon231137   74   X: 4596435-4596508 Caenorhabditis elegans
Exon231139   109   X: 4596565-4596673 Caenorhabditis elegans
Exon231141   1243   X: 4596723-4597965 Caenorhabditis elegans
Exon231143   470   X: 4598010-4598479 Caenorhabditis elegans
Exon231145   54   X: 4598614-4598667 Caenorhabditis elegans
Exon231147   173   X: 4598750-4598922 Caenorhabditis elegans
Exon231149   156   X: 4598972-4599127 Caenorhabditis elegans
Exon231150   814   X: 4599176-4599989 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T13H2.5b.1 4596199 4599989 -1

1 Sequence

Length
3279

1 Sequence Ontology Term

Identifier Name Description
transcript