WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13H2.5a.1 Sequence Name  T13H2.5a.1
Length (nt)  7651   Chromosome Location  X: 4596011-4605928
Chromosome . Primary Identifier  X Chromosome Location . Start  4596011
Chromosome Location . End  4605928 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13H2.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020496 spat-3 T13H2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13H2.5a T13H2.5a 7431   X: 4596199-4596384

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T13H2.5a.1 4596011 4605928 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231134   374   X: 4596011-4596384 Caenorhabditis elegans
Exon231136   74   X: 4596435-4596508 Caenorhabditis elegans
Exon231138   109   X: 4596565-4596673 Caenorhabditis elegans
Exon231140   1243   X: 4596723-4597965 Caenorhabditis elegans
Exon231142   470   X: 4598010-4598479 Caenorhabditis elegans
Exon231144   54   X: 4598614-4598667 Caenorhabditis elegans
Exon231146   173   X: 4598750-4598922 Caenorhabditis elegans
Exon231148   156   X: 4598972-4599127 Caenorhabditis elegans
Exon231151   1009   X: 4599176-4600184 Caenorhabditis elegans
Exon231152   381   X: 4600231-4600611 Caenorhabditis elegans
Exon231153   150   X: 4601295-4601444 Caenorhabditis elegans
Exon231154   245   X: 4601983-4602227 Caenorhabditis elegans
Exon231155   711   X: 4602281-4602991 Caenorhabditis elegans
Exon231156   369   X: 4603041-4603409 Caenorhabditis elegans
Exon231157   615   X: 4603456-4604070 Caenorhabditis elegans
Exon231158   958   X: 4604126-4605083 Caenorhabditis elegans
Exon231159   123   X: 4605133-4605255 Caenorhabditis elegans
Exon231160   351   X: 4605303-4605653 Caenorhabditis elegans
Exon231161   86   X: 4605843-4605928 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T13H2.5a.1 4596011 4605928 -1

1 Sequence

Length
7651

1 Sequence Ontology Term

Identifier Name Description
transcript