WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F15A8.5a Sequence Name  F15A8.5a
Length (nt)  1383   Chromosome Location  X: 4411591-4411738
Chromosome . Primary Identifier  X Chromosome Location . Start  4411591
Chromosome Location . End  4411738
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15A8.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33615 DOP-1, isoform a 52.1 460 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00075432
WBRNAi00000415
WBRNAi00044689
WBRNAi00013352

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F15A8.5a 4411591 4411738 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001052 dop-1 F15A8.5 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F15A8.5a 4411591 4411738 -1
CDS:F15A8.5a 4411782 4411927 -1
CDS:F15A8.5a 4412170 4412281 -1
CDS:F15A8.5a 4412329 4412456 -1
CDS:F15A8.5a 4413279 4413452 -1
CDS:F15A8.5a 4413918 4414131 -1
CDS:F15A8.5a 4414182 4414295 -1
CDS:F15A8.5a 4414344 4414516 -1
CDS:F15A8.5a 4415897 4416070 -1

1 Sequence

Length
1383

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F15A8.5a.3 F15A8.5a.3 1679   X: 4411304-4416079
Transcript:F15A8.5a.2 F15A8.5a.2 1781   X: 4411307-4418235
Transcript:F15A8.5a.1 F15A8.5a.1 2366   X: 4411307-4418851