WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52B9.1a.1 Sequence Name  C52B9.1a.1
Length (nt)  1559   Chromosome Location  X: 4286843-4291494
Chromosome . Primary Identifier  X Chromosome Location . Start  4286843
Chromosome Location . End  4291494 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52B9.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000510 cka-2 C52B9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52B9.1a C52B9.1a 1290   X: 4286979-4286992

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C52B9.1a.1 4286843 4291494 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230391   150   X: 4286843-4286992 Caenorhabditis elegans
Exon230392   78   X: 4287573-4287650 Caenorhabditis elegans
Exon230394   153   X: 4289485-4289637 Caenorhabditis elegans
Exon230397   220   X: 4289685-4289904 Caenorhabditis elegans
Exon230400   134   X: 4289951-4290084 Caenorhabditis elegans
Exon230403   330   X: 4290131-4290460 Caenorhabditis elegans
Exon230406   106   X: 4290504-4290609 Caenorhabditis elegans
Exon230409   180   X: 4291061-4291240 Caenorhabditis elegans
Exon230412   208   X: 4291287-4291494 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C52B9.1a.1 4286843 4291494 1

1 Sequence

Length
1559

1 Sequence Ontology Term

Identifier Name Description
transcript