WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52B9.1b.2 Sequence Name  C52B9.1b.2
Length (nt)  2860   Chromosome Location  X: 4286124-4291496
Chromosome . Primary Identifier  X Chromosome Location . Start  4286124
Chromosome Location . End  4291496 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52B9.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000510 cka-2 C52B9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52B9.1b C52B9.1b 1227   X: 4287622-4287650

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C52B9.1b.2 4286124 4291496 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230390   1527   X: 4286124-4287650 Caenorhabditis elegans
Exon230396   153   X: 4289485-4289637 Caenorhabditis elegans
Exon230399   220   X: 4289685-4289904 Caenorhabditis elegans
Exon230402   134   X: 4289951-4290084 Caenorhabditis elegans
Exon230405   330   X: 4290131-4290460 Caenorhabditis elegans
Exon230408   106   X: 4290504-4290609 Caenorhabditis elegans
Exon230411   180   X: 4291061-4291240 Caenorhabditis elegans
Exon230414   210   X: 4291287-4291496 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C52B9.1b.2 4286124 4291496 1

1 Sequence

Length
2860

1 Sequence Ontology Term

Identifier Name Description
transcript