WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52B9.6.1 Sequence Name  C52B9.6.1
Length (nt)  1771   Chromosome Location  X: 4274719-4279344
Chromosome . Primary Identifier  X Chromosome Location . Start  4274719
Chromosome Location . End  4279344 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52B9.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006680 twk-28 C52B9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52B9.6 C52B9.6 1572   X: 4274786-4274971

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C52B9.6.1 4274719 4279344 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230335   253   X: 4274719-4274971 Caenorhabditis elegans
Exon230336   143   X: 4275019-4275161 Caenorhabditis elegans
Exon230337   80   X: 4275209-4275288 Caenorhabditis elegans
Exon230338   96   X: 4275344-4275439 Caenorhabditis elegans
Exon230339   140   X: 4275886-4276025 Caenorhabditis elegans
Exon230340   216   X: 4276068-4276283 Caenorhabditis elegans
Exon230342   164   X: 4276742-4276905 Caenorhabditis elegans
Exon230343   202   X: 4277486-4277687 Caenorhabditis elegans
Exon230344   75   X: 4277733-4277807 Caenorhabditis elegans
Exon230345   108   X: 4278408-4278515 Caenorhabditis elegans
Exon230346   126   X: 4279002-4279127 Caenorhabditis elegans
Exon230347   168   X: 4279177-4279344 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C52B9.6.1 4274719 4279344 -1

1 Sequence

Length
1771

1 Sequence Ontology Term

Identifier Name Description
transcript