WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52B9.3a.1 Sequence Name  C52B9.3a.1
Length (nt)  1771   Chromosome Location  X: 4265851-4270554
Chromosome . Primary Identifier  X Chromosome Location . Start  4265851
Chromosome Location . End  4270554 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52B9.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016866 coel-1 C52B9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52B9.3a C52B9.3a 1299   X: 4265932-4266027

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C52B9.3a.1 4265851 4270554 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230300   177   X: 4265851-4266027 Caenorhabditis elegans
Exon230301   126   X: 4266076-4266201 Caenorhabditis elegans
Exon230303   111   X: 4266496-4266606 Caenorhabditis elegans
Exon230306   197   X: 4266902-4267098 Caenorhabditis elegans
Exon230308   154   X: 4268078-4268231 Caenorhabditis elegans
Exon230310   219   X: 4268394-4268612 Caenorhabditis elegans
Exon230312   182   X: 4268665-4268846 Caenorhabditis elegans
Exon230314   151   X: 4268996-4269146 Caenorhabditis elegans
Exon230316   454   X: 4270101-4270554 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C52B9.3a.1 4265851 4270554 1

1 Sequence

Length
1771

1 Sequence Ontology Term

Identifier Name Description
transcript