WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52B9.5.1 Sequence Name  C52B9.5.1
Length (nt)  1220   Chromosome Location  X: 4257061-4259321
Chromosome . Primary Identifier  X Chromosome Location . Start  4257061
Chromosome Location . End  4259321 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52B9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005717 srv-6 C52B9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52B9.5 C52B9.5 993   X: 4257061-4257198

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C52B9.5.1 4257061 4259321 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230279   138   X: 4257061-4257198 Caenorhabditis elegans
Exon230280   147   X: 4257248-4257394 Caenorhabditis elegans
Exon230281   90   X: 4257884-4257973 Caenorhabditis elegans
Exon230282   156   X: 4258019-4258174 Caenorhabditis elegans
Exon230283   114   X: 4258221-4258334 Caenorhabditis elegans
Exon230284   155   X: 4258610-4258764 Caenorhabditis elegans
Exon230285   108   X: 4258852-4258959 Caenorhabditis elegans
Exon230286   312   X: 4259010-4259321 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C52B9.5.1 4257061 4259321 1

1 Sequence

Length
1220

1 Sequence Ontology Term

Identifier Name Description
transcript