Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:W01H2.8 | W01H2.8 |
76
 |
X: 4223252-4223327 |
Other
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00199948 | 4223252 | 4223327 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_4222466..4223251 | 786 | X: 4222466-4223251 | Caenorhabditis elegans |
4 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Neuronally enriched transcripts according to a comparison of neuronal nuclei IP samples to total nuclei using isolation of nuclei from tagged specific cell types (INTACT) technology. | DESEQ2, fold change > 2 and FDR < 0.01. | WBPaper00062103:neuron_enriched | |
| Temperature Shift: 25C vs 15C for 16 hours at L4 larva stage. | Transcripts that showed significantly increased expression in AFD neurons comparing to in whole animals. | DESeq2, fold change > 2, FDR < 0.05. | WBPaper00065158:AFD_enriched |
| Transcripts that showed significantly decreased expression in daf-2(e1370) comparing to in N2. | Student's t-test, fold change > 2, p-value < 0.05. | WBPaper00055386:daf-2(e1370)_downregulated | |
| Hypoxia: 7% oxygen. | Transcripts that showed significantly decreased expression at animals treated with 7% oxygen, comparing to animals grown at 21% oxygen. | Fold change > 2, p-value < 0.05. | WBPaper00060661:hypoxia_downregulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_4223328..4227649 | 4322 | X: 4223328-4227649 | Caenorhabditis elegans |
