WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20B6.8c.1 Sequence Name  F20B6.8c.1
Length (nt)  3517   Chromosome Location  X: 4210578-4214561
Chromosome . Primary Identifier  X Chromosome Location . Start  4210578
Chromosome Location . End  4214561 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20B6.8c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001994 hpk-1 F20B6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20B6.8c F20B6.8c 2223   X: 4211710-4211950

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F20B6.8c.1 4210578 4214561 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230153   1373   X: 4210578-4211950 Caenorhabditis elegans
Exon230157   484   X: 4212008-4212491 Caenorhabditis elegans
Exon230162   740   X: 4212540-4213279 Caenorhabditis elegans
Exon230167   129   X: 4213329-4213457 Caenorhabditis elegans
Exon230172   551   X: 4213506-4214056 Caenorhabditis elegans
Exon230177   177   X: 4214275-4214451 Caenorhabditis elegans
Exon230182   63   X: 4214499-4214561 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F20B6.8c.1 4210578 4214561 -1

1 Sequence

Length
3517

1 Sequence Ontology Term

Identifier Name Description
transcript