WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06F4.2a.1 Sequence Name  T06F4.2a.1
Length (nt)  3190   Chromosome Location  X: 4095244-4100573
Chromosome . Primary Identifier  X Chromosome Location . Start  4095244
Chromosome Location . End  4100573 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06F4.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000531 clh-4 T06F4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06F4.2a T06F4.2a 3153   X: 4095244-4095582

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T06F4.2a.1 4095244 4100573 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229943   339   X: 4095244-4095582 Caenorhabditis elegans
Exon229945   192   X: 4095626-4095817 Caenorhabditis elegans
Exon229947   101   X: 4096225-4096325 Caenorhabditis elegans
Exon229949   66   X: 4096374-4096439 Caenorhabditis elegans
Exon229951   170   X: 4096494-4096663 Caenorhabditis elegans
Exon229953   125   X: 4096714-4096838 Caenorhabditis elegans
Exon229955   155   X: 4096886-4097040 Caenorhabditis elegans
Exon229957   131   X: 4097091-4097221 Caenorhabditis elegans
Exon229959   116   X: 4097268-4097383 Caenorhabditis elegans
Exon229961   159   X: 4097427-4097585 Caenorhabditis elegans
Exon229963   99   X: 4098009-4098107 Caenorhabditis elegans
Exon229965   153   X: 4098166-4098318 Caenorhabditis elegans
Exon229967   85   X: 4098363-4098447 Caenorhabditis elegans
Exon229969   184   X: 4098494-4098677 Caenorhabditis elegans
Exon229971   420   X: 4098977-4099396 Caenorhabditis elegans
Exon229973   273   X: 4099683-4099955 Caenorhabditis elegans
Exon229975   136   X: 4100008-4100143 Caenorhabditis elegans
Exon229977   92   X: 4100192-4100283 Caenorhabditis elegans
Exon229980   194   X: 4100380-4100573 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T06F4.2a.1 4095244 4100573 -1

1 Sequence

Length
3190

1 Sequence Ontology Term

Identifier Name Description
transcript