WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00023116 Gene Name  R02E12.t1
Sequence Name  ? R02E12.t1 Organism  Caenorhabditis elegans
Automated Description  Is affected by daf-2 based on microarray studies. Biotype  SO:0001272
Genetic Position  :± Length (nt)  ? 77
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00023116

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R02E12.t1 R02E12.t1 77   X: 3994602-3994678
 

Other

0 CDSs

0 RNAi Result

7 Allele

Public Name
gk963725
gk964260
gk964060
WBVar01980240
WBVar02122480
WBVar02044615
gk938680

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00023116 3994602 3994678 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_3994679..3997339   2661 X: 3994679-3997339 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in daf-2(e1370) comparing to in N2. Student's t-test, fold change > 2, p-value < 0.05. WBPaper00055386:daf-2(e1370)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00023116 3994602 3994678 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
77

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_3988939..3994601   5663 X: 3988939-3994601 Caenorhabditis elegans