WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19D2.2.1 Sequence Name  T19D2.2.1
Length (nt)  1560   Chromosome Location  X: 3940130-3943313
Chromosome . Primary Identifier  X Chromosome Location . Start  3940130
Chromosome Location . End  3943313 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19D2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004184 ptp-4A2 T19D2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19D2.2 T19D2.2 573   X: 3940850-3940973

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T19D2.2.1 3940130 3943313 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229760   844   X: 3940130-3940973 Caenorhabditis elegans
Exon229762   167   X: 3941023-3941189 Caenorhabditis elegans
Exon229765   289   X: 3941240-3941528 Caenorhabditis elegans
Exon229768   163   X: 3942215-3942377 Caenorhabditis elegans
Exon229772   97   X: 3943217-3943313 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T19D2.2.1 3940130 3943313 -1

1 Sequence

Length
1560

1 Sequence Ontology Term

Identifier Name Description
transcript