WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47F2.1c.1 Sequence Name  F47F2.1c.1
Length (nt)  1527   Chromosome Location  X: 3879780-3893309
Chromosome . Primary Identifier  X Chromosome Location . Start  3879780
Chromosome Location . End  3893309 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47F2.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018569 F47F2.1 F47F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47F2.1c F47F2.1c 978   X: 3888674-3888743

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F47F2.1c.1 3879780 3893309 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229582   142   X: 3879780-3879921 Caenorhabditis elegans
Exon229593   117   X: 3888487-3888603 Caenorhabditis elegans
Exon229599   91   X: 3888653-3888743 Caenorhabditis elegans
Exon229608   169   X: 3891077-3891245 Caenorhabditis elegans
Exon229617   90   X: 3891304-3891393 Caenorhabditis elegans
Exon229626   79   X: 3891487-3891565 Caenorhabditis elegans
Exon229635   95   X: 3891616-3891710 Caenorhabditis elegans
Exon229644   216   X: 3892467-3892682 Caenorhabditis elegans
Exon229653   136   X: 3892732-3892867 Caenorhabditis elegans
Exon229666   392   X: 3892918-3893309 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F47F2.1c.1 3879780 3893309 1

1 Sequence

Length
1527

1 Sequence Ontology Term

Identifier Name Description
transcript