WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35A5.4.1 Sequence Name  F35A5.4.1
Length (nt)  1727   Chromosome Location  X: 3789742-3792815
Chromosome . Primary Identifier  X Chromosome Location . Start  3789742
Chromosome Location . End  3792815 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35A5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018026 idpp-5 F35A5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35A5.4 F35A5.4 1575   X: 3789885-3789956

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F35A5.4.1 3789742 3792815 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229397   215   X: 3789742-3789956 Caenorhabditis elegans
Exon229398   205   X: 3790005-3790209 Caenorhabditis elegans
Exon229399   85   X: 3790261-3790345 Caenorhabditis elegans
Exon229400   124   X: 3790595-3790718 Caenorhabditis elegans
Exon229401   195   X: 3790763-3790957 Caenorhabditis elegans
Exon229402   126   X: 3791008-3791133 Caenorhabditis elegans
Exon229403   82   X: 3791320-3791401 Caenorhabditis elegans
Exon229404   257   X: 3791453-3791709 Caenorhabditis elegans
Exon229405   120   X: 3792187-3792306 Caenorhabditis elegans
Exon229406   66   X: 3792350-3792415 Caenorhabditis elegans
Exon229407   57   X: 3792466-3792522 Caenorhabditis elegans
Exon229408   132   X: 3792571-3792702 Caenorhabditis elegans
Exon229409   63   X: 3792753-3792815 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F35A5.4.1 3789742 3792815 -1

1 Sequence

Length
1727

1 Sequence Ontology Term

Identifier Name Description
transcript