WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11G1.4b.1 Sequence Name  R11G1.4b.1
Length (nt)  1777   Chromosome Location  X: 3646318-3650150
Chromosome . Primary Identifier  X Chromosome Location . Start  3646318
Chromosome Location . End  3650150 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11G1.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004727 sax-1 R11G1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11G1.4b R11G1.4b 1425   X: 3646655-3646702

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R11G1.4b.1 3646318 3650150 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229004   385   X: 3646318-3646702 Caenorhabditis elegans
Exon229007   119   X: 3647266-3647384 Caenorhabditis elegans
Exon229009   199   X: 3647430-3647628 Caenorhabditis elegans
Exon229011   113   X: 3647680-3647792 Caenorhabditis elegans
Exon229013   118   X: 3647843-3647960 Caenorhabditis elegans
Exon229015   165   X: 3648007-3648171 Caenorhabditis elegans
Exon229017   155   X: 3648215-3648369 Caenorhabditis elegans
Exon229019   208   X: 3649481-3649688 Caenorhabditis elegans
Exon229021   140   X: 3649744-3649883 Caenorhabditis elegans
Exon229023   109   X: 3649930-3650038 Caenorhabditis elegans
Exon229025   66   X: 3650085-3650150 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R11G1.4b.1 3646318 3650150 -1

1 Sequence

Length
1777

1 Sequence Ontology Term

Identifier Name Description
transcript