WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56B6.2i.1 Sequence Name  F56B6.2i.1
Length (nt)  2985   Chromosome Location  X: 3542548-3557596
Chromosome . Primary Identifier  X Chromosome Location . Start  3542548
Chromosome Location . End  3557596 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56B6.2i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004350 rgs-7 F56B6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56B6.2i F56B6.2i 2466   X: 3542631-3542673

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F56B6.2i.1 3542548 3557596 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228706   126   X: 3542548-3542673 Caenorhabditis elegans
Exon228710   115   X: 3542752-3542866 Caenorhabditis elegans
Exon228716   268   X: 3545556-3545823 Caenorhabditis elegans
Exon228719   126   X: 3546491-3546616 Caenorhabditis elegans
Exon228726   587   X: 3546665-3547251 Caenorhabditis elegans
Exon228731   72   X: 3547447-3547518 Caenorhabditis elegans
Exon228738   190   X: 3547569-3547758 Caenorhabditis elegans
Exon228745   90   X: 3547830-3547919 Caenorhabditis elegans
Exon228750   211   X: 3550061-3550271 Caenorhabditis elegans
Exon228758   128   X: 3552547-3552674 Caenorhabditis elegans
Exon228765   113   X: 3552814-3552926 Caenorhabditis elegans
Exon228776   134   X: 3556440-3556573 Caenorhabditis elegans
Exon228785   170   X: 3556632-3556801 Caenorhabditis elegans
Exon228794   125   X: 3556880-3557004 Caenorhabditis elegans
Exon228801   530   X: 3557067-3557596 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F56B6.2i.1 3542548 3557596 1

1 Sequence

Length
2985

1 Sequence Ontology Term

Identifier Name Description
transcript