WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56B6.2a.1 Sequence Name  F56B6.2a.1
Length (nt)  3118   Chromosome Location  X: 3542542-3557729
Chromosome . Primary Identifier  X Chromosome Location . Start  3542542
Chromosome Location . End  3557729 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56B6.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004350 rgs-7 F56B6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56B6.2a F56B6.2a 2460   X: 3542631-3542673

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F56B6.2a.1 3542542 3557729 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228704   132   X: 3542542-3542673 Caenorhabditis elegans
Exon228708   115   X: 3542752-3542866 Caenorhabditis elegans
Exon228713   268   X: 3545556-3545823 Caenorhabditis elegans
Exon228720   120   X: 3546497-3546616 Caenorhabditis elegans
Exon228723   587   X: 3546665-3547251 Caenorhabditis elegans
Exon228728   72   X: 3547447-3547518 Caenorhabditis elegans
Exon228734   190   X: 3547569-3547758 Caenorhabditis elegans
Exon228742   90   X: 3547830-3547919 Caenorhabditis elegans
Exon228746   211   X: 3550061-3550271 Caenorhabditis elegans
Exon228753   128   X: 3552547-3552674 Caenorhabditis elegans
Exon228760   113   X: 3552814-3552926 Caenorhabditis elegans
Exon228769   134   X: 3556440-3556573 Caenorhabditis elegans
Exon228778   170   X: 3556632-3556801 Caenorhabditis elegans
Exon228787   125   X: 3556880-3557004 Caenorhabditis elegans
Exon228803   663   X: 3557067-3557729 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F56B6.2a.1 3542542 3557729 1

1 Sequence

Length
3118

1 Sequence Ontology Term

Identifier Name Description
transcript