WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C12D12.5b.1 Sequence Name  C12D12.5b.1
Length (nt)  783   Chromosome Location  X: 3505566-3508995
Chromosome . Primary Identifier  X Chromosome Location . Start  3505566
Chromosome Location . End  3508995 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C12D12.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015716 sox-4 C12D12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C12D12.5b C12D12.5b 783   X: 3505566-3505829

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C12D12.5b.1 3505566 3508995 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228611   264   X: 3505566-3505829 Caenorhabditis elegans
Exon228614   132   X: 3505904-3506035 Caenorhabditis elegans
Exon228616   333   X: 3506087-3506419 Caenorhabditis elegans
Exon228618   54   X: 3508942-3508995 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C12D12.5b.1 3505566 3508995 -1

1 Sequence

Length
783

1 Sequence Ontology Term

Identifier Name Description
transcript