WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK377.2a.1 Sequence Name  ZK377.2a.1
Length (nt)  4481   Chromosome Location  X: 3451908-3465925
Chromosome . Primary Identifier  X Chromosome Location . Start  3451908
Chromosome Location . End  3465925 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK377.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004729 sax-3 ZK377.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK377.2a ZK377.2a 3810   X: 3452496-3452572

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZK377.2a.1 3451908 3465925 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228501   665   X: 3451908-3452572 Caenorhabditis elegans
Exon228503   310   X: 3452618-3452927 Caenorhabditis elegans
Exon228505   135   X: 3452982-3453116 Caenorhabditis elegans
Exon228507   749   X: 3453230-3453978 Caenorhabditis elegans
Exon228509   288   X: 3454038-3454325 Caenorhabditis elegans
Exon228511   794   X: 3454379-3455172 Caenorhabditis elegans
Exon228513   217   X: 3455231-3455447 Caenorhabditis elegans
Exon228518   386   X: 3461318-3461703 Caenorhabditis elegans
Exon228520   164   X: 3462336-3462499 Caenorhabditis elegans
Exon228522   261   X: 3462705-3462965 Caenorhabditis elegans
Exon228524   356   X: 3463510-3463865 Caenorhabditis elegans
Exon228526   156   X: 3465770-3465925 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZK377.2a.1 3451908 3465925 -1

1 Sequence

Length
4481

1 Sequence Ontology Term

Identifier Name Description
transcript