Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:C04F6.8 | C04F6.8 |
123
 |
X: 3411985-3412107 |
Other
9 Allele
| Public Name |
|---|
| gk963725 |
| gk964260 |
| gk963797 |
| gk963798 |
| otn11632 |
| otn13526 |
| gk963370 |
| gk757148 |
| gk541978 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00199313 | 3411985 | 3412107 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_3411616..3411984 | 369 | X: 3411616-3411984 | Caenorhabditis elegans |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in animals after 24 hour exposure to 100ug per ml silica nanoparticles (SiNPs). | The random variance model (RVM)t-test was applied toidentify differentially expressed mRNAs and miRNAsbetween the SiNPs-treated group and the control group. P-value <0.05 and fold change (FC) >1.5 were considered as the threshold screening between the SiNP-treated groupand the control group. | WBPaper00060100:SiNP_upregulated_mRNA | |
| Fungi infection: Fusarium oxysporum | Transcripts that showed significantly altered expression after infected by fungi Fusarium oxysporum from 0 t0 48 hours. | The Benjamini and Hochberg approach was used to adjust the resulting P-values for controlling the false-discovery rate. The transcripts having a false-discovery rate of < 0.05 were considered as differentially expressed. | WBPaper00053368:F.oxysporum_regulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_3412108..3412875 | 768 | X: 3412108-3412875 | Caenorhabditis elegans |
