WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11D5.1c.1 Sequence Name  F11D5.1c.1
Length (nt)  2310   Chromosome Location  X: 3334526-3347025
Chromosome . Primary Identifier  X Chromosome Location . Start  3334526
Chromosome Location . End  3347025 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11D5.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017380 F11D5.1 F11D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11D5.1c F11D5.1c 2310   X: 3334526-3334571

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F11D5.1c.1 3334526 3347025 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228279   46   X: 3334526-3334571 Caenorhabditis elegans
Exon228283   151   X: 3338088-3338238 Caenorhabditis elegans
Exon228285   74   X: 3338284-3338357 Caenorhabditis elegans
Exon228287   65   X: 3338417-3338481 Caenorhabditis elegans
Exon228289   264   X: 3338527-3338790 Caenorhabditis elegans
Exon228291   262   X: 3339698-3339959 Caenorhabditis elegans
Exon228293   109   X: 3340011-3340119 Caenorhabditis elegans
Exon228295   103   X: 3340177-3340279 Caenorhabditis elegans
Exon228297   61   X: 3340335-3340395 Caenorhabditis elegans
Exon228299   270   X: 3341113-3341382 Caenorhabditis elegans
Exon228303   248   X: 3344884-3345131 Caenorhabditis elegans
Exon228306   63   X: 3345285-3345347 Caenorhabditis elegans
Exon228309   87   X: 3345393-3345479 Caenorhabditis elegans
Exon228312   216   X: 3346285-3346500 Caenorhabditis elegans
Exon228315   217   X: 3346550-3346766 Caenorhabditis elegans
Exon228318   58   X: 3346905-3346962 Caenorhabditis elegans
Exon228319   16   X: 3347010-3347025 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F11D5.1c.1 3334526 3347025 1

1 Sequence

Length
2310

1 Sequence Ontology Term

Identifier Name Description
transcript