WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11D5.3b.2 Sequence Name  F11D5.3b.2
Length (nt)  2466   Chromosome Location  X: 3317667-3323964
Chromosome . Primary Identifier  X Chromosome Location . Start  3317667
Chromosome Location . End  3323964 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11D5.3b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017381 ddr-2 F11D5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11D5.3b F11D5.3b 2304   X: 3317879-3317961

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F11D5.3b.2 3317667 3323964 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228222   139   X: 3317667-3317805 Caenorhabditis elegans
Exon228224   106   X: 3317856-3317961 Caenorhabditis elegans
Exon228229   98   X: 3319178-3319275 Caenorhabditis elegans
Exon228232   134   X: 3319325-3319458 Caenorhabditis elegans
Exon228237   148   X: 3321028-3321175 Caenorhabditis elegans
Exon228240   290   X: 3321285-3321574 Caenorhabditis elegans
Exon228243   313   X: 3321619-3321931 Caenorhabditis elegans
Exon228246   268   X: 3321985-3322252 Caenorhabditis elegans
Exon228249   72   X: 3322472-3322543 Caenorhabditis elegans
Exon228252   227   X: 3322592-3322818 Caenorhabditis elegans
Exon228255   130   X: 3322868-3322997 Caenorhabditis elegans
Exon228258   78   X: 3323045-3323122 Caenorhabditis elegans
Exon228261   307   X: 3323452-3323758 Caenorhabditis elegans
Exon228262   156   X: 3323809-3323964 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F11D5.3b.2 3317667 3323964 1

1 Sequence

Length
2466

1 Sequence Ontology Term

Identifier Name Description
transcript