WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11D5.3a.1 Sequence Name  F11D5.3a.1
Length (nt)  2705   Chromosome Location  X: 3315314-3324242
Chromosome . Primary Identifier  X Chromosome Location . Start  3315314
Chromosome Location . End  3324242 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11D5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017381 ddr-2 F11D5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11D5.3a F11D5.3a 2394   X: 3315347-3315413

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F11D5.3a.1 3315314 3324242 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228216   100   X: 3315314-3315413 Caenorhabditis elegans
Exon228223   106   X: 3317856-3317961 Caenorhabditis elegans
Exon228227   98   X: 3319178-3319275 Caenorhabditis elegans
Exon228230   134   X: 3319325-3319458 Caenorhabditis elegans
Exon228235   148   X: 3321028-3321175 Caenorhabditis elegans
Exon228238   290   X: 3321285-3321574 Caenorhabditis elegans
Exon228241   313   X: 3321619-3321931 Caenorhabditis elegans
Exon228244   268   X: 3321985-3322252 Caenorhabditis elegans
Exon228247   72   X: 3322472-3322543 Caenorhabditis elegans
Exon228250   227   X: 3322592-3322818 Caenorhabditis elegans
Exon228253   130   X: 3322868-3322997 Caenorhabditis elegans
Exon228256   78   X: 3323045-3323122 Caenorhabditis elegans
Exon228259   307   X: 3323452-3323758 Caenorhabditis elegans
Exon228264   434   X: 3323809-3324242 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F11D5.3a.1 3315314 3324242 1

1 Sequence

Length
2705

1 Sequence Ontology Term

Identifier Name Description
transcript