WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09C4.1a.1 Sequence Name  K09C4.1a.1
Length (nt)  1757   Chromosome Location  X: 3298890-3301637
Chromosome . Primary Identifier  X Chromosome Location . Start  3298890
Chromosome Location . End  3301637 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09C4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019547 K09C4.1 K09C4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09C4.1a K09C4.1a 1566   X: 3298910-3299079

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K09C4.1a.1 3298890 3301637 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228154   190   X: 3298890-3299079 Caenorhabditis elegans
Exon228155   120   X: 3299275-3299394 Caenorhabditis elegans
Exon228156   164   X: 3299444-3299607 Caenorhabditis elegans
Exon228157   52   X: 3299651-3299702 Caenorhabditis elegans
Exon228158   75   X: 3299783-3299857 Caenorhabditis elegans
Exon228159   125   X: 3299906-3300030 Caenorhabditis elegans
Exon228160   95   X: 3300083-3300177 Caenorhabditis elegans
Exon228161   111   X: 3300227-3300337 Caenorhabditis elegans
Exon228163   116   X: 3300380-3300495 Caenorhabditis elegans
Exon228164   80   X: 3300539-3300618 Caenorhabditis elegans
Exon228165   113   X: 3300662-3300774 Caenorhabditis elegans
Exon228166   134   X: 3300933-3301066 Caenorhabditis elegans
Exon228168   73   X: 3301109-3301181 Caenorhabditis elegans
Exon228170   45   X: 3301230-3301274 Caenorhabditis elegans
Exon228172   54   X: 3301331-3301384 Caenorhabditis elegans
Exon228175   210   X: 3301428-3301637 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K09C4.1a.1 3298890 3301637 1

1 Sequence

Length
1757

1 Sequence Ontology Term

Identifier Name Description
transcript