WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40F4.5.1 Sequence Name  F40F4.5.1
Length (nt)  1627   Chromosome Location  X: 3252800-3256269
Chromosome . Primary Identifier  X Chromosome Location . Start  3252800
Chromosome Location . End  3256269 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006535 tba-9 F40F4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40F4.5 F40F4.5 1371   X: 3252963-3252980

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F40F4.5.1 3252800 3256269 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228047   181   X: 3252800-3252980 Caenorhabditis elegans
Exon228048   124   X: 3253026-3253149 Caenorhabditis elegans
Exon228049   99   X: 3253196-3253294 Caenorhabditis elegans
Exon228051   173   X: 3254327-3254499 Caenorhabditis elegans
Exon228052   462   X: 3254548-3255009 Caenorhabditis elegans
Exon228053   78   X: 3255051-3255128 Caenorhabditis elegans
Exon228054   117   X: 3255619-3255735 Caenorhabditis elegans
Exon228055   164   X: 3255821-3255984 Caenorhabditis elegans
Exon228056   229   X: 3256041-3256269 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F40F4.5.1 3252800 3256269 1

1 Sequence

Length
1627

1 Sequence Ontology Term

Identifier Name Description
transcript