WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40F4.6b.1 Sequence Name  F40F4.6b.1
Length (nt)  6726   Chromosome Location  X: 3235851-3243636
Chromosome . Primary Identifier  X Chromosome Location . Start  3235851
Chromosome Location . End  3243636 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F4.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018237 irg-7 F40F4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40F4.6b F40F4.6b 6654   X: 3235911-3235944

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F40F4.6b.1 3235851 3243636 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227981   94   X: 3235851-3235944 Caenorhabditis elegans
Exon227983   204   X: 3235992-3236195 Caenorhabditis elegans
Exon227985   317   X: 3236239-3236555 Caenorhabditis elegans
Exon227987   84   X: 3236600-3236683 Caenorhabditis elegans
Exon227989   146   X: 3236730-3236875 Caenorhabditis elegans
Exon227991   157   X: 3236919-3237075 Caenorhabditis elegans
Exon227993   344   X: 3237137-3237480 Caenorhabditis elegans
Exon227995   187   X: 3237528-3237714 Caenorhabditis elegans
Exon227997   132   X: 3237767-3237898 Caenorhabditis elegans
Exon227999   139   X: 3237945-3238083 Caenorhabditis elegans
Exon228001   118   X: 3238129-3238246 Caenorhabditis elegans
Exon228003   189   X: 3238296-3238484 Caenorhabditis elegans
Exon228005   2809   X: 3238532-3241340 Caenorhabditis elegans
Exon228007   144   X: 3241387-3241530 Caenorhabditis elegans
Exon228009   121   X: 3241577-3241697 Caenorhabditis elegans
Exon228011   118   X: 3241747-3241864 Caenorhabditis elegans
Exon228013   192   X: 3241913-3242104 Caenorhabditis elegans
Exon228015   72   X: 3242151-3242222 Caenorhabditis elegans
Exon228017   171   X: 3242270-3242440 Caenorhabditis elegans
Exon228019   61   X: 3242506-3242566 Caenorhabditis elegans
Exon228021   623   X: 3242613-3243235 Caenorhabditis elegans
Exon228023   112   X: 3243290-3243401 Caenorhabditis elegans
Exon228024   192   X: 3243445-3243636 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F40F4.6b.1 3235851 3243636 -1

1 Sequence

Length
6726

1 Sequence Ontology Term

Identifier Name Description
transcript