WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40F4.6a.1 Sequence Name  F40F4.6a.1
Length (nt)  6806   Chromosome Location  X: 3235754-3243628
Chromosome . Primary Identifier  X Chromosome Location . Start  3235754
Chromosome Location . End  3243628 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F4.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018237 irg-7 F40F4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40F4.6a F40F4.6a 6645   X: 3235911-3235944

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F40F4.6a.1 3235754 3243628 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227980   191   X: 3235754-3235944 Caenorhabditis elegans
Exon227982   204   X: 3235992-3236195 Caenorhabditis elegans
Exon227984   317   X: 3236239-3236555 Caenorhabditis elegans
Exon227986   84   X: 3236600-3236683 Caenorhabditis elegans
Exon227988   146   X: 3236730-3236875 Caenorhabditis elegans
Exon227990   157   X: 3236919-3237075 Caenorhabditis elegans
Exon227992   344   X: 3237137-3237480 Caenorhabditis elegans
Exon227994   187   X: 3237528-3237714 Caenorhabditis elegans
Exon227996   132   X: 3237767-3237898 Caenorhabditis elegans
Exon227998   139   X: 3237945-3238083 Caenorhabditis elegans
Exon228000   118   X: 3238129-3238246 Caenorhabditis elegans
Exon228002   189   X: 3238296-3238484 Caenorhabditis elegans
Exon228004   2809   X: 3238532-3241340 Caenorhabditis elegans
Exon228006   144   X: 3241387-3241530 Caenorhabditis elegans
Exon228008   121   X: 3241577-3241697 Caenorhabditis elegans
Exon228010   118   X: 3241747-3241864 Caenorhabditis elegans
Exon228012   192   X: 3241913-3242104 Caenorhabditis elegans
Exon228014   72   X: 3242151-3242222 Caenorhabditis elegans
Exon228016   171   X: 3242270-3242440 Caenorhabditis elegans
Exon228018   61   X: 3242506-3242566 Caenorhabditis elegans
Exon228020   623   X: 3242613-3243235 Caenorhabditis elegans
Exon228022   112   X: 3243290-3243401 Caenorhabditis elegans
Exon228025   175   X: 3243454-3243628 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F40F4.6a.1 3235754 3243628 -1

1 Sequence

Length
6806

1 Sequence Ontology Term

Identifier Name Description
transcript