WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28B4.3.1 Sequence Name  F28B4.3.1
Length (nt)  6742   Chromosome Location  X: 3227501-3235408
Chromosome . Primary Identifier  X Chromosome Location . Start  3227501
Chromosome Location . End  3235408 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28B4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017892 hrg-11.2 F28B4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28B4.3 F28B4.3 6690   X: 3227551-3227584

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F28B4.3.1 3227501 3235408 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227957   84   X: 3227501-3227584 Caenorhabditis elegans
Exon227958   204   X: 3227632-3227835 Caenorhabditis elegans
Exon227959   317   X: 3227882-3228198 Caenorhabditis elegans
Exon227960   84   X: 3228245-3228328 Caenorhabditis elegans
Exon227961   182   X: 3228374-3228555 Caenorhabditis elegans
Exon227962   157   X: 3228599-3228755 Caenorhabditis elegans
Exon227963   344   X: 3228801-3229144 Caenorhabditis elegans
Exon227964   187   X: 3229191-3229377 Caenorhabditis elegans
Exon227965   132   X: 3229422-3229553 Caenorhabditis elegans
Exon227966   139   X: 3229605-3229743 Caenorhabditis elegans
Exon227967   118   X: 3229790-3229907 Caenorhabditis elegans
Exon227968   189   X: 3229951-3230139 Caenorhabditis elegans
Exon227969   2809   X: 3230191-3232999 Caenorhabditis elegans
Exon227970   144   X: 3233044-3233187 Caenorhabditis elegans
Exon227971   121   X: 3233241-3233361 Caenorhabditis elegans
Exon227972   118   X: 3233417-3233534 Caenorhabditis elegans
Exon227973   192   X: 3233626-3233817 Caenorhabditis elegans
Exon227974   72   X: 3233861-3233932 Caenorhabditis elegans
Exon227975   171   X: 3234077-3234247 Caenorhabditis elegans
Exon227976   61   X: 3234293-3234353 Caenorhabditis elegans
Exon227977   623   X: 3234398-3235020 Caenorhabditis elegans
Exon227978   112   X: 3235070-3235181 Caenorhabditis elegans
Exon227979   182   X: 3235227-3235408 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F28B4.3.1 3227501 3235408 -1

1 Sequence

Length
6742

1 Sequence Ontology Term

Identifier Name Description
transcript