WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28B4.2a.1 Sequence Name  F28B4.2a.1
Length (nt)  3163   Chromosome Location  X: 3210470-3220367
Chromosome . Primary Identifier  X Chromosome Location . Start  3210470
Chromosome Location . End  3220367 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28B4.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017891 rgl-1 F28B4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28B4.2a F28B4.2a 2583   X: 3210976-3211096

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F28B4.2a.1 3210470 3220367 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227929   627   X: 3210470-3211096 Caenorhabditis elegans
Exon227931   194   X: 3211140-3211333 Caenorhabditis elegans
Exon227933   237   X: 3211385-3211621 Caenorhabditis elegans
Exon227935   448   X: 3212289-3212736 Caenorhabditis elegans
Exon227937   531   X: 3212795-3213325 Caenorhabditis elegans
Exon227939   311   X: 3213388-3213698 Caenorhabditis elegans
Exon227941   340   X: 3213748-3214087 Caenorhabditis elegans
Exon227944   69   X: 3214930-3214998 Caenorhabditis elegans
Exon227946   101   X: 3215058-3215158 Caenorhabditis elegans
Exon227948   126   X: 3215214-3215339 Caenorhabditis elegans
Exon227954   179   X: 3220189-3220367 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F28B4.2a.1 3210470 3220367 -1

1 Sequence

Length
3163

1 Sequence Ontology Term

Identifier Name Description
transcript