WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56E3.3a.1 Sequence Name  F56E3.3a.1
Length (nt)  4993   Chromosome Location  X: 3171428-3178695
Chromosome . Primary Identifier  X Chromosome Location . Start  3171428
Chromosome Location . End  3178695 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56E3.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002217 klp-4 F56E3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56E3.3a F56E3.3a 4686   X: 3171702-3171730

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F56E3.3a.1 3171428 3178695 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227846   303   X: 3171428-3171730 Caenorhabditis elegans
Exon227847   139   X: 3171815-3171953 Caenorhabditis elegans
Exon227849   63   X: 3172006-3172068 Caenorhabditis elegans
Exon227851   74   X: 3172117-3172190 Caenorhabditis elegans
Exon227854   61   X: 3173070-3173130 Caenorhabditis elegans
Exon227856   168   X: 3173204-3173371 Caenorhabditis elegans
Exon227858   171   X: 3173414-3173584 Caenorhabditis elegans
Exon227860   174   X: 3173629-3173802 Caenorhabditis elegans
Exon227862   283   X: 3173851-3174133 Caenorhabditis elegans
Exon227864   653   X: 3174183-3174835 Caenorhabditis elegans
Exon227866   300   X: 3174884-3175183 Caenorhabditis elegans
Exon227868   184   X: 3175234-3175417 Caenorhabditis elegans
Exon227870   321   X: 3175468-3175788 Caenorhabditis elegans
Exon227872   215   X: 3175846-3176060 Caenorhabditis elegans
Exon227874   359   X: 3176134-3176492 Caenorhabditis elegans
Exon227876   100   X: 3176546-3176645 Caenorhabditis elegans
Exon227878   571   X: 3176694-3177264 Caenorhabditis elegans
Exon227880   248   X: 3177545-3177792 Caenorhabditis elegans
Exon227882   88   X: 3177846-3177933 Caenorhabditis elegans
Exon227884   110   X: 3177987-3178096 Caenorhabditis elegans
Exon227886   235   X: 3178173-3178407 Caenorhabditis elegans
Exon227888   73   X: 3178464-3178536 Caenorhabditis elegans
Exon227890   100   X: 3178596-3178695 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F56E3.3a.1 3171428 3178695 -1

1 Sequence

Length
4993

1 Sequence Ontology Term

Identifier Name Description
transcript