WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10B3.10a.1 Sequence Name  K10B3.10a.1
Length (nt)  7807   Chromosome Location  X: 3117439-3127079
Chromosome . Primary Identifier  X Chromosome Location . Start  3117439
Chromosome Location . End  3127079 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10B3.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004951 spc-1 K10B3.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10B3.10a K10B3.10a 7284   X: 3117944-3118072

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K10B3.10a.1 3117439 3127079 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227763   634   X: 3117439-3118072 Caenorhabditis elegans
Exon227764   148   X: 3118129-3118276 Caenorhabditis elegans
Exon227766   303   X: 3118323-3118625 Caenorhabditis elegans
Exon227768   143   X: 3118678-3118820 Caenorhabditis elegans
Exon227770   577   X: 3118869-3119445 Caenorhabditis elegans
Exon227772   2466   X: 3119499-3121964 Caenorhabditis elegans
Exon227774   206   X: 3122014-3122219 Caenorhabditis elegans
Exon227777   156   X: 3122581-3122736 Caenorhabditis elegans
Exon227779   1161   X: 3122781-3123941 Caenorhabditis elegans
Exon227781   1581   X: 3123985-3125565 Caenorhabditis elegans
Exon227783   126   X: 3125618-3125743 Caenorhabditis elegans
Exon227785   85   X: 3126721-3126805 Caenorhabditis elegans
Exon227788   221   X: 3126859-3127079 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K10B3.10a.1 3117439 3127079 -1

1 Sequence

Length
7807

1 Sequence Ontology Term

Identifier Name Description
transcript