WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52E4.7.1 Sequence Name  F52E4.7.1
Length (nt)  2805   Chromosome Location  X: 3095428-3099852
Chromosome . Primary Identifier  X Chromosome Location . Start  3095428
Chromosome Location . End  3099852 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52E4.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018703 sec-3 F52E4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52E4.7 F52E4.7 2547   X: 3095671-3095922

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F52E4.7.1 3095428 3099852 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227675   495   X: 3095428-3095922 Caenorhabditis elegans
Exon227676   99   X: 3095972-3096070 Caenorhabditis elegans
Exon227677   125   X: 3096522-3096646 Caenorhabditis elegans
Exon227678   262   X: 3096695-3096956 Caenorhabditis elegans
Exon227679   127   X: 3097005-3097131 Caenorhabditis elegans
Exon227680   355   X: 3097181-3097535 Caenorhabditis elegans
Exon227681   247   X: 3097582-3097828 Caenorhabditis elegans
Exon227683   172   X: 3098138-3098309 Caenorhabditis elegans
Exon227684   173   X: 3098357-3098529 Caenorhabditis elegans
Exon227685   378   X: 3098579-3098956 Caenorhabditis elegans
Exon227686   99   X: 3099008-3099106 Caenorhabditis elegans
Exon227687   128   X: 3099534-3099661 Caenorhabditis elegans
Exon227688   145   X: 3099708-3099852 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F52E4.7.1 3095428 3099852 -1

1 Sequence

Length
2805

1 Sequence Ontology Term

Identifier Name Description
transcript