WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53B3.1.2 Sequence Name  F53B3.1.2
Length (nt)  1985   Chromosome Location  X: 2853674-2857603
Chromosome . Primary Identifier  X Chromosome Location . Start  2853674
Chromosome Location . End  2857603 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B3.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018740 tra-4 F53B3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53B3.1 F53B3.1 1632   X: 2853942-2853988

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F53B3.1.2 2853674 2857603 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227080   315   X: 2853674-2853988 Caenorhabditis elegans
Exon227083   127   X: 2854041-2854167 Caenorhabditis elegans
Exon227085   321   X: 2854433-2854753 Caenorhabditis elegans
Exon227087   259   X: 2855164-2855422 Caenorhabditis elegans
Exon227089   547   X: 2855475-2856021 Caenorhabditis elegans
Exon227091   200   X: 2856075-2856274 Caenorhabditis elegans
Exon227093   65   X: 2857056-2857120 Caenorhabditis elegans
Exon227094   69   X: 2857172-2857240 Caenorhabditis elegans
Exon227096   82   X: 2857522-2857603 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F53B3.1.2 2853674 2857603 -1

1 Sequence

Length
1985

1 Sequence Ontology Term

Identifier Name Description
transcript