WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02C5.5a.1 Sequence Name  T02C5.5a.1
Length (nt)  4660   Chromosome Location  X: 2716164-2725632
Chromosome . Primary Identifier  X Chromosome Location . Start  2716164
Chromosome Location . End  2725632 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02C5.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006742 unc-2 T02C5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02C5.5a T02C5.5a 4572   X: 2716252-2716369

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.5a.1 2716164 2725632 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226596   206   X: 2716164-2716369 Caenorhabditis elegans
Exon226598   92   X: 2716565-2716656 Caenorhabditis elegans
Exon226599   89   X: 2716915-2717003 Caenorhabditis elegans
Exon226614   311   X: 2717108-2717418 Caenorhabditis elegans
Exon226629   653   X: 2717465-2718117 Caenorhabditis elegans
Exon226644   783   X: 2718804-2719586 Caenorhabditis elegans
Exon226659   106   X: 2719637-2719742 Caenorhabditis elegans
Exon226674   107   X: 2720170-2720276 Caenorhabditis elegans
Exon226689   287   X: 2720819-2721105 Caenorhabditis elegans
Exon226704   213   X: 2721155-2721367 Caenorhabditis elegans
Exon226719   121   X: 2721418-2721538 Caenorhabditis elegans
Exon226734   428   X: 2721584-2722011 Caenorhabditis elegans
Exon226749   128   X: 2722059-2722186 Caenorhabditis elegans
Exon226764   58   X: 2722642-2722699 Caenorhabditis elegans
Exon226784   203   X: 2723259-2723461 Caenorhabditis elegans
Exon226794   90   X: 2724083-2724172 Caenorhabditis elegans
Exon226809   193   X: 2724219-2724411 Caenorhabditis elegans
Exon226824   273   X: 2724464-2724736 Caenorhabditis elegans
Exon226839   128   X: 2724824-2724951 Caenorhabditis elegans
Exon226854   191   X: 2725442-2725632 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.5a.1 2716164 2725632 -1

1 Sequence

Length
4660

1 Sequence Ontology Term

Identifier Name Description
transcript