WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02C5.3a.1 Sequence Name  T02C5.3a.1
Length (nt)  2796   Chromosome Location  X: 2698257-2705859
Chromosome . Primary Identifier  X Chromosome Location . Start  2698257
Chromosome Location . End  2705859 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02C5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020160 igcm-3 T02C5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02C5.3a T02C5.3a 1770   X: 2699280-2699409

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.3a.1 2698257 2705859 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226394   1153   X: 2698257-2699409 Caenorhabditis elegans
Exon226410   46   X: 2699462-2699507 Caenorhabditis elegans
Exon226421   140   X: 2700452-2700591 Caenorhabditis elegans
Exon226428   158   X: 2700990-2701147 Caenorhabditis elegans
Exon226435   542   X: 2701768-2702309 Caenorhabditis elegans
Exon226442   128   X: 2702365-2702492 Caenorhabditis elegans
Exon226449   132   X: 2702536-2702667 Caenorhabditis elegans
Exon226456   109   X: 2702928-2703036 Caenorhabditis elegans
Exon226465   79   X: 2703128-2703206 Caenorhabditis elegans
Exon226472   254   X: 2705505-2705758 Caenorhabditis elegans
Exon226476   55   X: 2705805-2705859 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.3a.1 2698257 2705859 -1

1 Sequence

Length
2796

1 Sequence Ontology Term

Identifier Name Description
transcript