WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02C5.3c.1 Sequence Name  T02C5.3c.1
Length (nt)  2226   Chromosome Location  X: 2698250-2705856
Chromosome . Primary Identifier  X Chromosome Location . Start  2698250
Chromosome Location . End  2705856 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02C5.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020160 igcm-3 T02C5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02C5.3c T02C5.3c 1878   X: 2698598-2698756

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.3c.1 2698250 2705856 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226393   507   X: 2698250-2698756 Caenorhabditis elegans
Exon226403   79   X: 2699331-2699409 Caenorhabditis elegans
Exon226412   46   X: 2699462-2699507 Caenorhabditis elegans
Exon226423   140   X: 2700452-2700591 Caenorhabditis elegans
Exon226430   158   X: 2700990-2701147 Caenorhabditis elegans
Exon226437   542   X: 2701768-2702309 Caenorhabditis elegans
Exon226444   128   X: 2702365-2702492 Caenorhabditis elegans
Exon226451   132   X: 2702536-2702667 Caenorhabditis elegans
Exon226458   109   X: 2702928-2703036 Caenorhabditis elegans
Exon226467   79   X: 2703128-2703206 Caenorhabditis elegans
Exon226474   254   X: 2705505-2705758 Caenorhabditis elegans
Exon226475   52   X: 2705805-2705856 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.3c.1 2698250 2705856 -1

1 Sequence

Length
2226

1 Sequence Ontology Term

Identifier Name Description
transcript