WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54G2.1e.1 Sequence Name  F54G2.1e.1
Length (nt)  4045   Chromosome Location  X: 2621272-2640348
Chromosome . Primary Identifier  X Chromosome Location . Start  2621272
Chromosome Location . End  2640348 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54G2.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018837 F54G2.1 F54G2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54G2.1e F54G2.1e 3558   X: 2621745-2621830

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54G2.1e.1 2621272 2640348 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226207   559   X: 2621272-2621830 Caenorhabditis elegans
Exon226214   76   X: 2621881-2621956 Caenorhabditis elegans
Exon226219   112   X: 2622476-2622587 Caenorhabditis elegans
Exon226224   163   X: 2622634-2622796 Caenorhabditis elegans
Exon226229   82   X: 2622844-2622925 Caenorhabditis elegans
Exon226236   84   X: 2623625-2623708 Caenorhabditis elegans
Exon226241   240   X: 2624173-2624412 Caenorhabditis elegans
Exon226246   195   X: 2624460-2624654 Caenorhabditis elegans
Exon226251   114   X: 2624696-2624809 Caenorhabditis elegans
Exon226256   186   X: 2624860-2625045 Caenorhabditis elegans
Exon226261   69   X: 2625091-2625159 Caenorhabditis elegans
Exon226266   121   X: 2625207-2625327 Caenorhabditis elegans
Exon226271   690   X: 2625382-2626071 Caenorhabditis elegans
Exon226276   480   X: 2626513-2626992 Caenorhabditis elegans
Exon226281   215   X: 2627043-2627257 Caenorhabditis elegans
Exon226286   119   X: 2627428-2627546 Caenorhabditis elegans
Exon226291   67   X: 2627602-2627668 Caenorhabditis elegans
Exon226296   156   X: 2627945-2628100 Caenorhabditis elegans
Exon226301   127   X: 2629547-2629673 Caenorhabditis elegans
Exon226309   190   X: 2640159-2640348 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54G2.1e.1 2621272 2640348 -1

1 Sequence

Length
4045

1 Sequence Ontology Term

Identifier Name Description
transcript