WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54G2.1a.1 Sequence Name  F54G2.1a.1
Length (nt)  4271   Chromosome Location  X: 2621272-2664373
Chromosome . Primary Identifier  X Chromosome Location . Start  2621272
Chromosome Location . End  2664373 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54G2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018837 F54G2.1 F54G2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54G2.1a F54G2.1a 3798   X: 2621745-2621830

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54G2.1a.1 2621272 2664373 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226208   559   X: 2621272-2621830 Caenorhabditis elegans
Exon226212   76   X: 2621881-2621956 Caenorhabditis elegans
Exon226217   112   X: 2622476-2622587 Caenorhabditis elegans
Exon226222   163   X: 2622634-2622796 Caenorhabditis elegans
Exon226227   82   X: 2622844-2622925 Caenorhabditis elegans
Exon226234   84   X: 2623625-2623708 Caenorhabditis elegans
Exon226239   240   X: 2624173-2624412 Caenorhabditis elegans
Exon226244   195   X: 2624460-2624654 Caenorhabditis elegans
Exon226249   114   X: 2624696-2624809 Caenorhabditis elegans
Exon226254   186   X: 2624860-2625045 Caenorhabditis elegans
Exon226259   69   X: 2625091-2625159 Caenorhabditis elegans
Exon226264   121   X: 2625207-2625327 Caenorhabditis elegans
Exon226269   690   X: 2625382-2626071 Caenorhabditis elegans
Exon226274   480   X: 2626513-2626992 Caenorhabditis elegans
Exon226279   215   X: 2627043-2627257 Caenorhabditis elegans
Exon226284   119   X: 2627428-2627546 Caenorhabditis elegans
Exon226289   67   X: 2627602-2627668 Caenorhabditis elegans
Exon226294   156   X: 2627945-2628100 Caenorhabditis elegans
Exon226299   127   X: 2629547-2629673 Caenorhabditis elegans
Exon226311   66   X: 2650067-2650132 Caenorhabditis elegans
Exon226312   101   X: 2650186-2650286 Caenorhabditis elegans
Exon226316   249   X: 2664125-2664373 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54G2.1a.1 2621272 2664373 -1

1 Sequence

Length
4271

1 Sequence Ontology Term

Identifier Name Description
transcript