WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52H2.7.1 Sequence Name  F52H2.7.1
Length (nt)  2454   Chromosome Location  X: 2566543-2572653
Chromosome . Primary Identifier  X Chromosome Location . Start  2566543
Chromosome Location . End  2572653 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52H2.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018719 ccd-5 F52H2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52H2.7 F52H2.7 2313   X: 2566673-2566892

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F52H2.7.1 2566543 2572653 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226120   350   X: 2566543-2566892 Caenorhabditis elegans
Exon226121   104   X: 2567602-2567705 Caenorhabditis elegans
Exon226122   108   X: 2567756-2567863 Caenorhabditis elegans
Exon226123   70   X: 2567910-2567979 Caenorhabditis elegans
Exon226124   161   X: 2568031-2568191 Caenorhabditis elegans
Exon226125   168   X: 2569200-2569367 Caenorhabditis elegans
Exon226126   154   X: 2569430-2569583 Caenorhabditis elegans
Exon226127   134   X: 2570417-2570550 Caenorhabditis elegans
Exon226128   164   X: 2570650-2570813 Caenorhabditis elegans
Exon226129   182   X: 2570858-2571039 Caenorhabditis elegans
Exon226130   159   X: 2571094-2571252 Caenorhabditis elegans
Exon226131   120   X: 2571299-2571418 Caenorhabditis elegans
Exon226132   97   X: 2571464-2571560 Caenorhabditis elegans
Exon226133   230   X: 2571945-2572174 Caenorhabditis elegans
Exon226134   155   X: 2572348-2572502 Caenorhabditis elegans
Exon226135   98   X: 2572556-2572653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F52H2.7.1 2566543 2572653 -1

1 Sequence

Length
2454

1 Sequence Ontology Term

Identifier Name Description
transcript